en-sep2016cov164x213DOWNLOAD the September 2016 Issue PDF

Nutrient Nuances Modeled

By Lisa Owens-Viani

San Francisco Bay is becoming less opaque as the sediments power-washed into the Estuary by miners so long ago gradually disperse. This lets sunlight penetrate deeper into the water, creating more favorable conditions for the kind of problematic algal blooms that can shut down crab fisheries and keep people and their pooches out of the water. Scientists have collaborated on some new computer models, however, that may help them predict where and when nutrients, like nitrogen and phosphate from discharges and runoff, may exacerbate the situation.

nut-500model_nh4-landsatgray“It’s still a turbid estuary,” says the San Francisco Estuary Institute’s Dave Senn. “But there’s been a relaxation of some of the things keeping a lid on algae growth.”

Scientists at SFEI are collaborating with the US Geological Survey and a Dutch research institute to build and share new, open-source, state of the art models of local nutrient dynamics based not only on hydrology but also on physics, chemistry, and biology. This ambitious modeling endeavor is being funded by the Regional Monitoring Program and the San Francisco Bay Nutrient Management Strategy.

nut-model_din-landsatgray-500Senn says the new models will be important tools for quantifying how excess nutrients influence water quality today, as well as for forecasting conditions under future scenarios, like what could happen to algae growth if sediment concentrations go down by another 50 percent. The models can help investigate the effects of seasonal and spatial variations in turbidity, the mixing by the strong tides in the Bay, and how the abundance of grazing organisms like clams keep algal growth in check.

The models will also help wastewater managers answer questions about actions they might take to mitigate or prevent impairment of the Bay in certain areas, and to identify nutrient concentrations that will be protective of ecosystem health, says Senn. Data on past algal blooms and other events are being used to calibrate and validate the models, which can then be re-run to test various management strategies, says SFEI’s Rusty Holleman.

nut500-model_no3-landsatgray“If you see in the observational record that one day chlorophyll was alarmingly high in a spot, and then two months later not there at all, you could do a lot of reasoning based just on those observations,” says Holleman. “But if we can replicate that in a model, we can pick apart the factors and then test hypotheticals.”

Other specific issues the models could help elucidate are the spatial influence of nutrient loads from each nutrient source, including wastewater outfalls and nonpoint sources like storm drains and creeks, and how sloughs and ponds at the margins of the Bay affect water quality, among many others.

East Bay Dischargers Authority General Manager Mike Connor says information gleaned from the new models could also help wastewater managers figure out if some parts of the Bay will need to be managed differently than others. “Right now the North and South Bays have very similar nutrient levels but very different chlorophyll responses. We suspect the newly restored salt ponds in the South Bay may be acting as little reactors that grow algae and then feed it back into the Bay, but these kinds of processes may work differently in the North Bay. The models will allow us to test different potential management strategies without having to do giant experiments in the Bay.”

The Regional Water Board’s Tom Mumley says his agency is developing nutrient water quality objectives and permit implementation requirements. “Given the significant costs of potential current and future nutrient management scenarios, our modeling investments will definitely yield decision dividends.”

Ultimately, say Connor and Senn, the modeling results could be used to help structure a nutrient credit or trading system for wastewater dischargers in the Bay, similar to carbon trading. But a key difference is that the atmosphere is well mixed with carbon from emissions around the globe — while the Bay is not well mixed. “You’re not going to influence summertime nutrient levels in South Bay by adjusting the inputs in Suisun Bay,” says Senn. “But that’s where the modeling can be really helpful; it takes into account nutrient inputs from each location and their transport and biogeochemical reactions when estimating how they contribute to nutrient concentrations in space and time.”

Dave Senn: [email protected]
Rusty Holleman: [email protected]
Mike Connor: [email protected]

NEXT STORY: Teachable Moments

About the author

Lisa Owens Viani is a freelance writer and editor specializing in environmental, science, land use, and design topics. She writes for several national magazines including Landscape Architecture Magazine, ICON and Architecture, and has written for Estuary for many years. She is the co-founder of the nonprofit Raptors Are The Solution, www.raptorsarethesolution.org, which educates people about the role of birds of prey in the ecosystem and how rodenticides in the food web are affecting them.

Related Posts

subisdence on 4 delta islands map

Asked to suggest an appropriate future for four Delta islands owned by the Metropolitan Water District, it’s difficult not to want the moon.

Why not richer rice fields, more wetlands, better boat launches, extended trails, even eco-tourism? ? A new survey for the Delta Islands Adaptation Project, funded by a Prop 1 Watershed Restoration Grant, wants the public’s opinion on the importance of 10 possible land-use objectives leading to the selection of one...
chart by Hutton

An examination of 50 years of records reveals an apparent seasonal bias in estimates of freshwater flow from the Delta to the San Francisco Estuary.

The seasonal bias suggests flows were overestimated during the summer months and underestimated during the winter. Estimates of Delta outflow use a measurement called net Delta outflow index (NDOI), which is determined by taking the amount of Delta inflow, from sources such as the Calaveras, Sacramento, and San Joaquin rivers,...
diagram of fish net trawl

Fish monitoring surveys in the San Francisco Estuary net different numbers of different fish species depending upon when and how they sample.

According to a new study published in San Francisco Estuary and Watershed Science, even surveys that target the same part of the water column can come up with significantly different catches. The study’s authors analyzed decades worth of data from the California Department of Fish and Wildlife (CDFW) Fall Midwater...