Decades ago, resource managers first learned of declining Delta smelt numbers not through surveys targeting the once-abundant native fish, but rather as a byproduct of long-term monitoring programs for non-native striped bass. Now, the authors of a new study published in the March 2021 issue of San Francisco Estuary and Watershed Science advocate for the use of bycatch data from the recently established Enhanced Delta Smelt Monitoring (EDSM) program to better understand juvenile Chinook salmon distribution. “The scope of [this multi-million dollar Delta smelt survey] has not really been seen before in the Estuary,” says lead author Brian Mahardja, a biologist with the US Bureau of Reclamation, “that’s why there was a call to see what else we can gain out of this program.” The study team, also representing the US Fish and Wildlife Service and the California Department of Water Resources, analyzed juvenile Chinook salmon bycatch data collected through the EDSM to assess its potential to augment data obtained through other fish surveys. They found that some under-sampled regions of the Delta see improved coverage through EDSM, and that the program’s boat-based, labor-intensive random sampling technique “can provide more statistically robust abundance estimates relative to traditional methods.” That said, the authors also concluded that the use of fixed sampling stations and low-tech methods like beach seining, in which a net is operated manually from shore, still provide a cost-effective way to monitor salmon occurrence in certain parts of the Estuary. “The take-home point is about the trade-offs of different sampling methods,” Mahardja said. “It costs a lot to run these programs, and we want to make sure that we’re getting as much as we can out of them.”

Pearls in the ocean of information that our reporters didn’t want you to miss
Above: EDSM crew retrieving a net during trawling in Montezuma. Photo by Kate Erly.
 

The robust monitoring programs established to track now-rare Delta smelt could benefit other native fishes, too.

Decades ago, resource managers first learned of declining Delta smelt numbers not through surveys targeting the once-abundant native fish, but rather as a byproduct of long-term monitoring programs for non-native striped bass. Now, the authors of a new study published in the March 2021 issue of San Francisco Estuary and Watershed Science advocate for the use of bycatch data from the recently established Enhanced Delta Smelt Monitoring (EDSM) program to better understand juvenile Chinook salmon distribution. “The scope of [this multi-million dollar Delta smelt survey] has not really been seen before in the Estuary," says lead author Brian Mahardja, a biologist with the US Bureau of Reclamation, "that’s why there was a call to see what else we can gain out of this program.” The study team, also representing the US Fish and Wildlife Service and the California Department of Water Resources, analyzed juvenile Chinook salmon bycatch data collected through the EDSM to assess its potential to augment data obtained through other fish surveys. They found that some under-sampled regions of the Delta see improved coverage through EDSM, and that the program’s boat-based, labor-intensive random sampling technique “can provide more statistically robust abundance estimates relative to traditional methods.” That said, the authors also concluded that the use of fixed sampling stations and low-tech methods like beach seining, in which a net is operated manually from shore, still provide a cost-effective way to monitor salmon occurrence in certain parts of the Estuary. “The take-home point is about the trade-offs of different sampling methods,” Mahardja said. “It costs a lot to run these programs, and we want to make sure that we’re getting as much as we can out of them.”

About the author

Nate Seltenrich is a freelance science and environmental journalist who covers infrastructure, restoration, and related topics for Estuary. He also contributes to the San Francisco Chronicle, Sonoma and Marin magazines, the journal Environmental Health Perspectives, and other local and national publications, on subjects ranging from public lands and renewable energy to the human health impacts of climate change. He lives in Petaluma with his wife, two boys, and four ducks. www.nate-reports.com

Related Posts

Climate change is heating, salinizing, and expanding the San Francisco Estuary, a review of nearly 200 scientific studies concludes.

Sea level rise, changing snow and rainfall patterns, and warmer waters are some of the changes already observed in the Estuary and expected to continue through the rest of the century as greenhouse gas concentrations rise. Changes to water are at the heart of the documented and further expected impacts;...

Groundwater pumped from subsided islands back into Delta channels through 200 or more active outfalls can be laden with excess nitrogen transported from island soils, report the authors of a new study.

The Sacramento-San Joaquin Delta contains more than 50 peat islands. Most have subsided—some as much as three meters — as a result of drainage for farming, and must maintain artificial water tables below the land surface via managed pumping. According to researchers from the University of California at Santa Cruz...

Researchers are applying a novel genetic technique as part of the development of an annual estimate for the number of juvenile spring-run Chinook salmon entering the Delta.

The technique, spearheaded by geneticist Melinda Baerwald from the California Department of Water Resources, allows researchers to accurately distinguish young spring-run salmon from other runs by targeting DNA sequences specific to these fish.   In a paper published in San Francisco Estuary and Watershed Science, lead authors Baerwald and Peter...